Microarray Suggestion Criteria
The National Institute of Allergy and Infectious Diseases (NIAID) supported Pathogen Functional Genomics Resource Center (PFGRC) designs, constructs, and distributes glass slide DNA microarrays for pathogens and biodefense related organisms (Select A-C agents). Currently, the PFGRC supports DNA microarrays for the 38 organisms listed here. In continuing its efforts to provide the infectious disease and biodefense communities with the microarray resources most relevant to their research efforts, the PFGRC is soliciting input for selection of its next set of reference/species microarrays. The criteria for organism selection may be found here.
Organisms Available for Custom Cloning
Organism |
Strain |
Bacillus anthracis |
Ames |
Bacillus anthracis |
Sterne |
Bacillus cereus |
10987 |
Bacillus cereus |
ATCC14579 |
Burkholderia mallei |
CMI3 ATCC23344 |
Campylobacter jejuni subsp. Jejuni |
NCTC 11168 |
Chlamydia trachomatis |
D/UW-3/CX |
Escherichia coli |
CFT073 |
Escherichia coli |
MG1655 |
Francisella tularensis |
SCHU S4 |
Helicobacter pylori |
26695 |
Helicobacter pylori |
J99 |
Influenza A Virus |
A/Albany/22/1957 (H2N2) |
Influenza A Virus |
A/Albany/9/1967 (H2N2) |
Influenza A Virus |
A/black duck/Maryland/834/2002(H4N8) |
Influenza A Virus |
A/blue-wngd teal/Ohio/907/2002(H1N6) |
Influenza A Virus |
A/chicken/Italy/22A/1998(H5N9) |
Influenza A Virus |
A/chicken/NewSouthWales/2/1997(H7N4) |
Influenza A Virus |
A/environmnt/Maryland/566/2006(H7N9) |
Influenza A Virus |
A/mallard/Alaska/708/2005 (H8N4) |
Influenza A Virus |
A/mallard/Maryland/2022/2005 (H6N8) |
Influenza A Virus |
A/mallard/Ohio/170/1999 (H6N5) |
Influenza A Virus |
A/mallard/Ohio/1717/2005 (H3N6) |
Influenza A Virus |
A/mallard/Ohio/181/1986 (H3N1) |
Influenza A Virus |
A/mallard/Ohio/265/1987 (H1N9) |
Influenza A Virus |
A/mallard/Ohio/37/1986 (H2N1) |
Influenza A Virus |
A/mallard/Ohio/421/1987 (H7N8) |
Influenza A Virus |
A/mallard/Ohio/654/2002 (H3N8) |
Influenza A Virus |
A/mallard/Ohio/664/2002 (H6N6) |
Influenza A Virus |
A/mallard/Ohio/666/2002 (H6N2) |
Influenza A Virus |
A/mallard/Ohio/668/2002 (H4N6) |
Influenza A Virus |
A/mallard/Ohio/686/2002 (H4N2) |
Influenza A Virus |
A/New South Wales/18/1999 (H1N1) |
Influenza A Virus |
A/New South Wales/4/1999 (H3N2) |
Influenza A Virus |
A/New York/20/2003 (H3N2) |
Influenza A Virus |
A/New York/32/2003 (H3N2) |
Influenza A Virus |
A/New York/78/2002 (H1N2) |
Influenza A Virus |
A/snow goose/Maryland/410/2005(H6N1) |
Influenza A Virus |
A/teal/Italy/3812/2005 (H5N3) |
Influenza A Virus |
A/Wellington/6/2004 (H3N2) |
Listeria monocytogenes |
1/2a F6854 |
Listeria monocytogenes |
4b F2365 |
Listeria monocytogenes |
4b H7858 |
Listeria monocytogenes |
EGD-e |
Mycobacterium smegmatis |
MC2 |
Mycobacterium tuberculosis |
CDC1551 |
Mycobacterium tuberculosis |
H37Rv |
Neisseria gonorrhoeae |
FA1090 |
Neisseria meningitidis |
MC58 |
Pseudomonas aeruginosa |
PA01 |
Rickettsia prowazekii |
Madrid E |
Salmonella enterica serovar Typhi |
CT18 |
Salmonella enterica serovar Typhi |
Ty2 |
Salmonella typhimurium |
LT2 |
Shigella flexneri |
2457T |
Staphylococcus aureus |
COL |
Staphylococcus aureus |
MW2 |
Staphylococcus aureus |
Mu50 |
Streptococcus agalactiae |
2603V/R |
Streptococcus pneumoniae |
G54 |
Streptococcus pneumoniae |
R6 |
Streptococcus pneumoniae |
TIGR4 |
Vibrio cholerae |
El Tor N16961 |
Yersinia pestis |
KIM |
Yersinia pseudotuberculosis |
IP32953 |